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  1. Roux, S., A. K. Hawley, M. T. Beltran, M. Scofield, P. Schwientek, R. Stepanauskas, T. Woyke, S. J. Hallam, and M. B. Sullivan. 2014. Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell and environmental genomics. eLife 3:03125. Read more

  2. McCalley CK, Woodcroft BJ, Hodgkins SB, Wehr R, Kim E-H, Mondav R, Crill PM, Chanton JP, Rich VI, Tyson GW, Saleska SR. 2014. Methane dynamics regulated by microbial community response to permafrost thaw . Nature. 514: 478-481. Read more

  3. Mondav* R, Woodcroft* BJ, Kim E-H, McCalley MK, Hodgkins SB, Crill PM, Chanton JP, Hurst GB, VerBerkmoes N, Saleska SR, Hugenholtz P, Rich VI, Tyson GW. 2014. Discovery of a novel methanogen prevalent in thawing permafrost. Nature Communications. 5: 3212. doi:10.1038/ncomms4212 . Read more


  4. Brum, J., J. C. Ignacio-Espinoza, S. Roux, and et. al. 2015. Global patterns and ecological drivers of ocean viral communities. Science.  348:6237. Read more


  5. Roux, S., F. Enault, B. H. Hurwitz, and M. B. Sullivan. 2015. VirSorter: mining viral signal from microbial genomic data. PeerJ 3:e985. Read more


  6. Roux, S., S. Hallam, T. Woyke, and M. B. Sullivan. 2015. Viral dark matter and virus–host interactions resolved from publicly available microbial genomes. eLife. 10.7554/eLife.08490#sthash.enoDv5F5.dpuf.  Read more