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Publications

  1. Roux, S., A. K. Hawley, M. T. Beltran, M. Scofield, P. Schwientek, R. Stepanauskas, T. Woyke, S. J. Hallam, and M. B. Sullivan. 2014. Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell and environmental genomics. eLife 3:03125. Read more
     


  2. McCalley CK, Woodcroft BJ, Hodgkins SB, Wehr R, Kim E-H, Mondav R, Crill PM, Chanton JP, Rich VI, Tyson GW, Saleska SR. 2014. Methane dynamics regulated by microbial community response to permafrost thaw . Nature. 514: 478-481. Read more
     


  3. Mondav* R, Woodcroft* BJ, Kim E-H, McCalley MK, Hodgkins SB, Crill PM, Chanton JP, Hurst GB, VerBerkmoes N, Saleska SR, Hugenholtz P, Rich VI, Tyson GW. 2014. Discovery of a novel methanogen prevalent in thawing permafrost. Nature Communications. 5: 3212. doi:10.1038/ncomms4212 . Read more


     

  4. Brum, J., J. C. Ignacio-Espinoza, S. Roux, and et. al. 2015. Global patterns and ecological drivers of ocean viral communities. Science.  348:6237. Read more


     

  5. Roux, S., F. Enault, B. H. Hurwitz, and M. B. Sullivan. 2015. VirSorter: mining viral signal from microbial genomic data. PeerJ 3:e985. Read more


     

  6. Roux, S., S. Hallam, T. Woyke, and M. B. Sullivan. 2015. Viral dark matter and virus–host interactions resolved from publicly available microbial genomes. eLife. 10.7554/eLife.08490#sthash.enoDv5F5.dpuf.  Read more